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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12324631, gi|...
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFVAAMTAS LLASSLPVLI TVADVVVPCL IVSSITCLTC HSPAQHFRQY SFKTSLIDVP  60
   61 LVSLIRSLVI ICLSWLCEDT RLAYGLYLET VMLSSFGGIL LLLVKTCVFT VNSTLEEAKV 120
  121 YHLKISWGMP VLLLSSAVFG LAHVVVAYRK SCGARRKLMY HKIDQEAVLS CKSGFSGYKK 180
  181 AHRQSFTRSN CKILTFAGEF RQKSFRGTSL DREELLQPRL LANADSLFIK IQGLYVHYKQ 240
  241 RTSPSVSSFV IISDSAAEMN ARRSRLLDKQ MSNLTSQTQN SHFHRSYTIQ PDRSSLYDPL 300
  301 LASHNTTPIS LFDKDGVNQI NSIKLGDDME KDENTGIVLV HGFGGGVFSW RHVMGELSLQ 360
  361 LGCRVVAYDR PGWGLTSRLI RKDWEKRNLA NPYKLESQVD LLLSFCSEMG FSSVILVGHD 420
  421 DGGLLALKAA ERMQASTSKH NITIKGVVLI NVSLSREVVP AFARILLHTS LRKKHLVRPL 480
  481 LRTEITQLVN RRAWCDTTKL TTDITMLYKA PLCLEAWDEA LNEISKLSYE MILSPQNASA 540
  541 LVKSIGDLPV LVVAGAEDAL VPLKSSQVLA SKLTNSRLVE ISGCGHLPHE ECPTTLVSAL 600
  601 GSFICRLIPK LPNS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle