YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149032868, gi...
Protein type:	Transmembrane
Type Confidence:	0.67
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHLQAGLSP ETLEKARLEL NENPDTLHQD IQEVRDMVIT RPDIGFLRTD DAFILRFLRA  60
   61 RKFHHFEAFR LLAQYFEYRQ QNLDMFKSFK ATDPGIKQAL KDGFPGGLAN LDHYGRKILV 120
  121 LFAANWDQSR YTLVDILRAI LLSLEAMIED PELQVNGFVL IIDWSNFTFK QASKLTPSML 180
  181 RLAIEGLQVR VYHCYCFFVS YMLFALYVRI LDNLWTNKTS KPKGYRFFYN VKDTIK

Type	Start	End	Confidence
Cytoplasmic	1	188	0.50
Transmembrane Helix	189	208	0.62
Non-Cytoplasmic	209	236	0.80