YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9759365
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTLISPSLA PFSLHLHKPS LFSTALRFSF SINNITPTNS PPSTISTRKL QTKATRVTSS  60
   61 SSSQPLSSSS PGEIHVVVGP MFSGKTTTLL RRILAERETG KRIAIIKSNK DTRYCTESIV 120
  121 THDGEKYPCW SLPDLSSFKE RFGFDDYENR LDVIGIDEAQ FFGDLYEFCR EAADKEGKTV 180
  181 IVAGLDGDFM RRRFGSVLDL IPIADTVTKL TSRCEVCGKR ALFTMRKTEE KETELIGGAE 240
  241 VYMPVCRSHY VCGQNVLETA RAVLDSSNNH SVVASSL

Type	Start	End	Confidence
Signal Peptide	1	23	0.60
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	277	0.99