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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME60_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIMMVQNIS FLSLHLLLIL LLCLRPLTTV ADGNSTNIDG WCDKTPYPYP CKRYFIKHSG  60
   61 FRLPTQISEF RVLLVEAAMD RAVSAWDKLT NSSKNCTDFK KQAVLADCIN LYGDTVMQLN 120
  121 RTLQGVSSKT GRRCTDFDAQ TWLSTALTNT ETCRRGSSDL NVSDFTTPIV SNTKISHLIS 180
  181 NCLAVNGALL TAGKNDSTTG DSKGFPTWVS RKERRLLQLQ SVRANLVVAK DGSGHFKTVQ 240
  241 AAIDVAGRRK VTSGRFVIYV KRGIYQENLN VRLNNDNIML VGDGMRYTII TGGRSVKGGY 300
  301 TTYSSATAGI EGLHFIAKGI AFQNTAGPAK GQAVALRSSS DLSIFYRCSI EGYQDTLMVH 360
  361 SQRQFYRECY IYGTVDFIFG NAAVVFQNCI ILPRLPLKGQ ANVITAQGRT DLFQNTGISI 420
  421 HNSIIIPAPD LKPVVRSVKT YMGRPWMMYS RTVVLKTYID SVVSPVGWSP WTKGSTYGLD 480
  481 TLFYAEYKNI GPASSTRWRV RWKGFHVLSK ASDASAFSVG KFIAGTAWLP GSGIPFTSEL 540
  541 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle