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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GPDL7_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRFIIFFSL FIHLCVAAPQ TPAAAAAVPA KKWLTLNGQE PAVVARGGFS GLFPESSASA  60
   61 NDLAIGTSSP GLTMLCNLQM TKDGVGLCLS DIILDNATTI SSVFPKAQKT YKVNGQDLKG 120
  121 WFVLDYDADT IFNNVTLVQN IFSRPSIFDG QMSVSAVEDV LGTKPPKFWL SVQYDAFYME 180
  181 HKLSPAEYLR SLQFRGINVI SSPEIGFLKS IGMDAGRAKT KLIFEFKDPE AVEPTTNKKY 240
  241 SEIQQNLAAI KAFASGVLVP KDYIWPIDSA KYLKPATTFV ADAHKAGLEV YASGFANDLR 300
  301 TSFNYSYDPS AEYLQFVDNG QFSVDGVITD FPPTASQSIT CFSHQNGNLP KAGHALVITH 360
  361 NGASGDYPGC TDLAYQKAVD DGADVIDCSV QMSKDGIAFC HDAADLTAST TAMTIFMSRA 420
  421 TSVPEIQPTN GIFSFDLTWA EIQSVKPQIE NPFTATGFQR NPANKNAGKF ITLADFLDFS 480
  481 KAKAVTGVMI NIENAAYLAS KKGLGVVDAV KSALAKSTLD KQSTQKVLIQ SDDSSVLASF 540
  541 EAVPPYTRVL SIDKEIGGAP KPSVDEIKKY AEAVNLLRTS LVTVSQSFTT GKTNVVEEMH 600
  601 KGNISVYVSV LRNEYISVAF DYFSDPTIEL ATFISGSGVD GVITEFPATA TRYLKSPCSD 660
  661 LNKEQPYAIL PAEAGGLVVV ADKEAQPPAS APNPPLEAKD VIDPPLPPVA NLAASNATGG 720
  721 AQSHPPPASG TVANAANLGL SLLAMLALGV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle