YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149027819, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGLEACAMA SSSSVPASST QSKKPRDKIA DWFRQALLKK PKKMPISQES HLSDGSQTAT  60
   61 QDGLSPSSGS SPRSHSSSQS QSSTPSCSSG MSPTSPPTHV DSSSSSSSGR WSKDYDVCVC 120
  121 HSEEDLEVAQ ELVSYLEGSK ASLRCFLQFR DAAPGGAIVS ELCQALSGSH CRVLLITPGF 180
  181 LRDPWCKYQM LQALTEAPGS EGCTIPLLSG LTRAAYPPEL RFMYYVDGRG QDGGFYQVKE 240
  241 AVIHYLETLS

Type	Start	End	Confidence
Signal Peptide	1	20	0.88
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	250	0.99