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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP10_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSTLKHLLL LLLVLIRHVD SAAIVKSLPG LEGRLPFELE TGYIGIGEEE DIQLFYYFIK  60
   61 SENNPKEDPL LLWLDGGPGC SSLGGLLFEN GPVALKSAVY NGSNPSLFST TYSWTKMANI 120
  121 IYLDQPVGSG FSYSRTPIGK SSDTSEVKRI HEFLQKWLSK HPQFFSNPFY VTGDSYSGMI 180
  181 VPALVQEISK GNYICCKHLI NLQGYVLGNP ITYAEHEKNY RIPFSHGMSL ISDELYESLK 240
  241 RNCKGNYENV DPRNTKCVRL VEEYHKCTDK INTQHILIPD CDKKGHGITS PDCYYYLYFL 300
  301 IECWANNERV REALHVTKGT KGQWQRCNWT IPYDNNIISS VPYHMDNSIN GYRSLIYSGD 360
  361 HDITMPFQAT QAWIKSLNYS IVDDWRPWMI NDQIAGYTRT YSNKMTFATV KGGGHTAEYL 420
  421 PNESSIMFQR WISGQPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle