YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15240885, gi|...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSFLSSFC ATAIIFFTLF GTIYFMFYRK VKSHQENKTI ASSLALPTIP SSLSRKYDVF  60
   61 PSFHGADVRK TFLSHMLKEF KRKGIVPFID NDIDRSKSIG PELDEAIRGS KIAIVMLSKN 120
  121 YASSSWCLNE LVEITKCRKD LNQTVMTIFY GVDPTDVKKQ TGEFGKVFER TCESKTEEQV 180
  181 KTWREVLDGA ATIAGEHWHI WDNEASMIEK ISIDVSNILN RSSPSRDFDD LIGMEAHMEK 240
  241 MKSLLSLHSN EVKMIGIWGP SGIGKTTIAR VLYNRFSGDF GLSVFMDNIK ELMHTRPVGS 300
  301 DDYSAKLHLQ NQLMSEITNH KETKITHLGV VPDRLKDNKV LIVLDSIDQS IQLDAIAKET 360
  361 QWFGPGSRII ITTQDQKLLE AHDINNIYKV EFPSKYEAFQ IFCTYAFGQN FPKDGFEKLA 420
  421 WEVTDLLGEL PLGLRVMGSH FRRMSKDDWV IALPRLKTRL DANIQSILKF SYDALSPEDK 480
  481 DLFLHIACLF NNEEIVKVED YLALDFLDAR HGLHLLAEKS LIDLEGVNYK VLKMHNLLEQ 540
  541 LGKEIVRYHP AHHSIREPEK RQFLVDTKDI CEVLADGTGS KSIKGICFDL DNLSGRLNIS 600
  601 ERAFEGMTNL KFLRVLRDRS EKLYLPQGLN YLPKKLRLIE WDYFPMKSLP SNFCTTYLVN 660
  661 LHMRKSKLEK LWEGKQPLGN LKWMNLSNSR NLKELPDLST ATKLQDLNLT RCSSLVEIPF 720
  721 SIGNTTNLEK LNLVMCTSLV ELPSSIGSLH KLRELRLRGC SKLEVLPTNI SLESLDNLDI 780
  781 TDCSLLKSFP DISTNIKHLS LARTAINEVP SRIKSWSRLR YFVVSYNENL KESPHALDTI 840
  841 TMLSSNDTKM QELPRWVKKI SRLETLMLEG CKNLVTLPEL PDSLSNIGVI NCESLERLDC 900
  901 SFYKHPNMFI GFVNCLKLNK EARELIQTSS STCSILPGRR VPSNFTYRKT GGSVLVNLNQ 960
  961 SPLSTTLVFK ACVLLVNKDD KKKEANGTSF QVYYRIMDKR KLGVIVPWRS AHGFVVPPIL1020
 1021 AEHLLTFELE ADVKTNEFFF EFEVNRYEVV IKECGVLQL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle