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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149036420, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVHRGSARA APASDKVQKN KPAQTSGLKQ GSRMAKIFGF EWADLSSWQS VVTLLNRPTD  60
   61 PANLAVFRFL FAFLMLLDIP QERGLSSLDR KYLDGLDVCR FPLLDALRPL PLDWMYLVYT 120
  121 IMFLGALGMM LGLWYRLSCV LFLLPYWYVF LLDKTSWNNH SYLYGLLAFQ LTFMDANHYW 180
  181 SVDGLLSAQK KNAHVPLWNY TVLRGQIFIV YFIAGVKKLD ADWVEGYSME HLSRHWLFSP 240
  241 FKLVLSEELT SLLVVHWCGL LLDLSAGFLL FFDASRPIGL VFVSYFHCMN SQLFSIGMFP 300
  301 YVMLASSPLF CSAEWPRKLV ARCPKRLQEL LPAKAAPRPS ASCVYKRARA KAGQKPGLRH 360
  361 HLGAVFTLLY LLEQLFLPYS HFLTQGYNNW TNGLYGYSWD MMVHSRSHQH VKITYRDGLT 420
  421 GELGYLNPGV FTQSRRWKDH ADMLKQYATC LSLLLPKYNV TEPQIYFDIW VSINDRFQQR 480
  481 LFDPRVDIVQ AVWSPFRRTP WVQPLLMDLS PWRTKLQDIK SSLDNHTEVV FIADFPGLHL 540
  541 ENFVSEDLGN TSIQLLQGEV TVELVAEQKN QTLREGEKMQ LPAGEYHKVY TVSSSPSCYM 600
  601 YVYVNTTEVA LEQDLAYLQE LKEKVENGSE TGPLPPELQP LLEGEVKGGP EPTPLVQTFL 660
  661 RRQRKLQEIE RRRNSPLHER FLRFVLRKLY VFRRSFLMTR ISLRNLLFGR PSLEQLAQEV 720
  721 TYANLRPFEP VDESSASNTD SSDPHPSEPD SEHVHSEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle