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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157823815, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAWPCDSMM LARGGLSAEV ESCVEEGGFP VGSLINRFFL METTAAAASA GGFFPSFLLL  60
   61 AFGTLVAAVL GAAHRLGLFY QLMHKVDKTS IRHGGESVAA VLRAHGVRFV FTLVGGHISP 120
  121 LLVACEKLGI RVVDTRHEVT AVFAADAVAR LTGTVGVAAV TAGPGLTNTV TAVKNAQVAQ 180
  181 SPVLLLGGAA STLLQKRGAL QAIDQMSLFR PLCKFCASVR RVRDIVPTLR AAMAAAQSGT 240
  241 PGPVFVELPL DVLYPYFMVE KEMIPAQLPK GLMGRVVVWY LQNCLANLFA GAWEPRPEGP 300
  301 LPLDIPQASP QQVQRCVEIL SRAKRPLLVL GSQALLPPTP ANKLRAAVET LGVPCFLGGM 360
  361 SRGLLGRNHP LHIRQNRSAA LKKADVVVLA GAVCDFRLSY GRVLNRKSSI IIVNRNRDDM 420
  421 LLNSDIFWKP QEAVQGDVGS FMIKLVEGLQ GQTWSSDWVE ELRKADQQKE QTYRDKALLP 480
  481 VPQHLNPVRL LQQVEETLPD NALLVVDGGD FVATAAYLVQ PRGPLRWLDP GAFGTLGVGA 540
  541 GFALGAKLCQ PEAEVWCLFG DGAFGYSLIE FDTFVRHKVP VIALVGNDAG WTQISREQVP 600
  601 RLGSDVACSL AYTDYHKAAM GLGAQGLILS RDNEDQVVKV LRDGQKLCQE GHAVVVNILI 660
  661 GRTDFRDGSI SV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle