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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: C734A_ARATH
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEESSSWFI PKVLVLSVIL SLVIVKGMSL LWWRPRKIEE HFSKQGIRGP PYHFFIGNVK  60
   61 ELVGMMLKAS SHPMPFSHNI LPRVLSFYHH WRKIYGATFL VWFGPTFRLT VADPDLIREI 120
  121 FSKSEFYEKN EAHPLVKQLE GDGLLSLKGE KWAHHRKIIS PTFHMENLKL LVPVVLKSVT 180
  181 DMVDKWSDKL SENGEVEVDV YEWFQILTED VISRTAFGSS YEDGRAVFRL QAQQMLLCAE 240
  241 AFQKVFIPGY RFFPTRGNLK SWKLDKEIRK SLLKLIERRR QNAIDGEGEE CKEPAAKDLL 300
  301 GLMIQAKNVT VQDIVEECKS FFFAGKQTTS NLLTWTTILL SMHPEWQAKA RDEVLRVCGS 360
  361 RDVPTKDHVV KLKTLSMILN ESLRLYPPIV ATIRRAKSDV KLGGYKIPCG TELLIPIIAV 420
  421 HHDQAIWGND VNEFNPARFA DGVPRAAKHP VGFIPFGLGV RTCIGQNLAI LQAKLTLAVM 480
  481 IQRFTFHLAP TYQHAPTVLM LLYPQHGAPI TFRRLTNHED 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle