YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149034641, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPTMALHRP SNQTLASMLL ALLLVCPALA SEIVGGRPAQ PHAWPFMVSL QRRGGHFCGA  60
   61 TLIARNFVMS AAHCVNGRNF QSVQVVLGAH DLRRREPTRQ IFSVQRIFEN GFDPSRLLND 120
  121 IVIIQLNGSA TINANVQVAE LPAQGQGVGN RTPCVAMGWG RLGTNRPLPS VLQELNVTVV 180
  181 TNLCRRRVNV CTLVPRRQAG ICFGDSGGPL VCNNLVQGID SFIRGGCGSG FYPDAFAPVA 240
  241 EFADWINSII RSHDDRPLTN PKDREREGRT N

Type	Start	End	Confidence
Signal Peptide	1	30	0.99
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	271	0.99