YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38566634, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASVEYFPY YSPPSHQHPL PSPVPPPPSH ISPPPPPFSP PHHPPPPHFS PPHQPPPSPY  60
   61 PHPHPPPPSP YPHPHQPPPP PHVLPPPPPT PAPGHHVIIV VVISLGSLFF LAFLAAALFC 120
  121 YLKKRRKSST KAEIIEFDEH LKVQETIVQG PHGEQTRVVM LEEDIHLVED IHKTEKLSRP 180
  181 SHLSSTGRHA IDISDPNHHF TEQKS

Type	Start	End	Confidence
Non-Cytoplasmic	1	96	0.94
Transmembrane Helix	97	121	0.93
Cytoplasmic	122	205	0.95