YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BZP60_ARATH
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEFGSIDL LGDEDFFFDF DPSIVIDSLP AEDFLQSSPD SWIGEIENQL MNDENHQEES  60
   61 FVELDQQSVS DFIADLLVDY PTSDSGSVDL AADKVLTVDS PAAADDSGKE NSDLVVEKKS 120
  121 NDSGSEIHDD DDEEGDDDAV AKKRRRRVRN RDAAVRSRER KKEYVQDLEK KSKYLERECL 180
  181 RLGRMLECFV AENQSLRYCL QKGNGNNTTM MSKQESAVLL LESLLLGSLL WLLGVNFICL 240
  241 FPYMSHTKCC LLRPEPEKLV LNGLGSSSKP SYTGVSRRCK GSRPRMKYQI LTLAA

Type	Start	End	Confidence
Non-Cytoplasmic	1	223	0.69
Transmembrane Helix	224	244	0.75
Cytoplasmic	245	295	0.57