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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT32_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRALILVAI CLMLTLNNAA ETKVHIVYLG EKQHDDPDSV TESHHQMLWS ILGSKEAAHD  60
   61 SMTPWLLSFR SQTNQFPSES TLRFYELQTT RTWDYLQHTS KHPKNILNQT NMGDQLIIGV 120
  121 VDSVTLNWFG FILLKQEYGQ SLNHSVTMVL DQYQNVGKEV QLGHAENPEY ISPRDFDGHG 180
  181 THVAATAAGS FVPDTNYLGL GRGTARGGAP RARIAMYKAC WHLVTGATTC SAADLVKAID 240
  241 EAIHDGVDVL SISNGFSVPL FPEVDTQDGV AVGAFHAVAK GIPVVCAGGN AGPSSQTISN 300
  301 TAPWIITVAA TTQDRSFPTF ITLGNNVTVV GQALYQGPDI DFTELVYPED SGASNETFYG 360
  361 VCEDLAKNPA HIIEEKIVLC FTKSTSYSTM IQAASDVVKL DGYGVIVARN PGHQLSPCFG 420
  421 FPCLAVDYEL GTDILFYIRS TRSPVAKIQP TRTLVGLPVA TKVATFSSRG PNSISPAILK 480
  481 PDIAAPGVNI LAATSPNDTF YDKGFAMKSG TSMSAPVVAG IVALLKSVHP HWSPAAIRSA 540
  541 IVTTAWRTDP SGEPIFADGS NRKLADPFDY GGGVVNSEKA ANPGLVYDMG VKDYILYLCS 600
  601 VGYTDSSITG LVSKKTVCAN PKPSVLDLNL PSITIPNLAK EVTITRTVTN VGPVGSVYKP 660
  661 VIEAPMGVNV TVTPSTLVFN AYTRKLSFKV RVLTNHIVNT GYYFGSLTWT DSVHNVVIPV 720
  721 SVRTQIMQRY YDEN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle