YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6850837, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFPVGYTEV FLPKLFVQTL SILGFIRTIV FSIFRFLGLS DFLEMDQTWP DYTSYPTRIP  60
   61 ETRSPFSALL IREILPVIKF EELTNSGEDL PENCAVCLYE FEGEQEIRWL RNCRHIFHRS 120
  121 CLDRWMDHDQ KTCPLCRTPF VPDEMQEEFN QRLWAASGVH DFHCPVTELL

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.65
Transmembrane Helix	15	39	0.74
Cytoplasmic	40	170	0.59