YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4204271, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.63
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALSDKLAD AYQNARPRYP IDWFTKLAAR TGQHKSAWDV GTGNGQAAIG LAEYFEKVTA  60
   61 TDINEAQLKR AVKHERISYH HTPTTMSEDQ MVALVGGDNS VDLIVAAQAV HYFDLAPFYN 120
  121 VAKRVLRKEG GLIAVFVYND IIISPEVDSI MKRLVDSTFP FRTPVMNLAF DGYKTLPFPF 180
  181 ESIGMGSEGK PIMLDIPHKL SLKGFIGFLR SWQPAMKAKE RGVELVTEDL ISKFEDAWGD 240
  241 DDDVKDIFYK AHMIVGKLSA SDIERHRKRF DTNCVVTTLK DHNNSAVIAS VTAAAFAGVA 300
  301 AYCAYSARKN S

Type	Start	End	Confidence
Non-Cytoplasmic	1	285	0.93
Transmembrane Helix	286	306	0.60
Cytoplasmic	307	311	0.51