YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149036788, gi...
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAPGFTASL VAGGVAGAAV DLILFPLDTI KTRLQSPQGF NQAGGFRGIY AGVPSAAIGS  60
   61 FPNAAAFFLT YEYVKSLLHT DSTSHFRPMK HMLAASTGEV VHGCFCKCWQ VWTYLWRPQF 120
  121 HLRS

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.58
Transmembrane Helix	6	27	0.73
Cytoplasmic	28	45	0.56
Transmembrane Helix	46	69	0.66
Non-Cytoplasmic	70	91	0.71
Transmembrane Helix	92	111	0.46
Cytoplasmic	112	124	0.47