YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6850340, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVDEVSIFI GVASLTVSVW WFINKFTYLE AVPTSNAIPI HSVAVRVGST QRVVMEIIIT  60
   61 FALVYTVYAT AIDSNNGTLG TIAPLAIRLI VGANILAAGP FSGGPMNPGR SFGSSLAVGN 120
  121 FSGH

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.49
Transmembrane Helix	6	28	0.69
Cytoplasmic	29	52	0.57
Transmembrane Helix	53	72	0.84
Non-Cytoplasmic	73	80	0.57
Transmembrane Helix	81	104	0.81
Cytoplasmic	105	124	0.62