YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|171847038, gi...
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQGLWSCPG VTRWHPGCAP CCTVLGVTSW PTCFLGSPSL TTSATAPVSC WPPECGSGVA  60
   61 LLSNLEQLLR GVWKPETNEI LHMSFPTKAS LYGAILFTLQ QTRWLPVSKA SLIFVFTMFM 120
  121 VSCKVFLTAT HSHSSPFDVL EGYICPVLFG ATWGGDHHHD NHGAPHGMGL GTQHSGLPAK 180
  181 AKEELSEGFR KKKTKKAD

Type	Start	End	Confidence
Cytoplasmic	1	109	0.46
Transmembrane Helix	110	130	0.76
Non-Cytoplasmic	131	198	0.63