YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SKL1_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIFSASASL TLTGFVPRLL PLLSPQARTT LCKPLLSSSS TRLISCHSRI APSRSLADQS  60
   61 ASTGISVVDS DPIDVVKRKA MDIAPELKGA SIFLVGINNS IKTNTGKLLA EALRYYYFDS 120
  121 DNLITEAAGG NVSAQALKEA DEKAFQESET EVLKQLSSMG RLVVCAGDGA VQSLRNLALL 180
  181 RHGISIWIDV PLDITAKGDD DSFHSEPSPE LFDTLKASYE KSRKGYETAD VSISLEKIAT 240
  241 KLEFEDLEAV TSEDIALEIL KEIEKLTRVK KMMEEASRPF

Type	Start	End	Confidence
Signal Peptide	1	25	0.68
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	280	0.99