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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9755449, gi|2...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQQSSTHLL CGVVLLQLFA AQVDAQRSTS PWQTLSGDAP LVIARGGFSG LFPDSSLAAY  60
   61 QFAMVVSVAD VVLWCDVQLT KDGHGICFPD LNLANASNSE EVYPNRQKSY PVNGVTTKGW 120
  121 FPIDFSLTEL QKVLFSLIRG ILSRSGKFDE NGYSISTVQN VATQMKPALF WLNVQHDEFY 180
  181 EQHNLSMSSF LLSTSRTVSI DFISSPEVNF FRKIAGGFGN NGPSFVFQFM GKEDFEPTTN 240
  241 RTYGSILSNL SFVKTFASGI LVPKSYILPL DDKQYLLPHT SLVQDAHKAG LKLYASGFAN 300
  301 DVDIAYNYSW DPVSEYLSFV DNGNFSVDGM LSDFPLTASA SVDCFSHIGR NATKQEQKHY 360
  361 HLPMVRASVD FLVISKNGAS GEYPGCTKLA YEKAIKDGSD VIDCPVQMSS DGIPFCSSSI 420
  421 DLVNSTTVGQ THLRNRSIIV PEISSVAGIF TFSLTWHEIQ SLTPAISNPF RENGMSRNPN 480
  481 ERNSGNLISL YEFLNLAKNS TSLSGILISL ENVVYLREKK GLDVVKVVLN RLTETGYIVG 540
  541 TLKVMIQSTT RLVLVDFKNQ STYKTVYKIK ETIGNITDSA IEDIKKFANA VVINKASVFP 600
  601 NSDSFLTGQT TNVLERLQKF QLPVYVELFQ NEFVSQPFDF FADETVEINA YIFGAGINGT 660
  661 ITEFPYTAAR YKRNRCLGRE EVPPYMLPVN PGGVLTLIST SSLPPAQDPN PIFTHDDVTE 720
  721 PPLPPVIAKS PTSTLGTPST IAKPLISWSV AGVVLFLVLL TLVFCFHRKR ETRLRQQKLK 780
  781 ALIPLEHYTY AQVKRITKSF AEVVGRGGFG IVYKGTLSDG RVVAVKVLKD TKGNGEDFIN 840
  841 EVATMSRTSH LNIVSLLGFC SEGSKRAIIY EFLENGSLDK FILGKTSVNM DWTALYRIAL 900
  901 GVAHGLEYLH HSCKTRIVHF DIKPQNVLLD DSFCPKVSDF GLAKLCEKKE SILSMLDTRG 960
  961 TIGYIAPEMI SRVYGNVSHK SDVYSYGMLV LEIIGARNKE KANQACASNT SSMYFPEWVY1020
 1021 RDLESCKSGR HIEDGINSEE DELAKKMTLV GLWCIQPSPV DRPAMNRVVE MMEGSLEALE1080
 1081 VPPRPVLQQI PISNLHESSI LSEDVSVYTE G

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle