YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y2267_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASISWVLNS LFSILLLTQR VNSESTAEKQ ALLTFLQQIP HENRLQWNES DSACNWVGVE  60
   61 CNSNQSSIHS LRLPGTGLVG QIPSGSLGRL TELRVLSLRS NRLSGQIPSD FSNLTHLRSL 120
  121 YLQHNEFSGE FPTSFTQLNN LIRLDISSNN FTGSIPFSVN NLTHLTGLFL GNNGFSGNLP 180
  181 SISLGLVDFN VSNNNLNGSI PSSLSRFSAE SFTGNVDLCG GPLKPCKSFF VSPSPSPSLI 240
  241 NPSNRLSSKK SKLSKAAIVA IIVASALVAL LLLALLLFLC LRKRRGSNEA RTKQPKPAGV 300
  301 ATRNVDLPPG ASSSKEEVTG TSSGMGGETE RNKLVFTEGG VYSFDLEDLL RASAEVLGKG 360
  361 SVGTSYKAVL EEGTTVVVKR LKDVMASKKE FETQMEVVGK IKHPNVIPLR AYYYSKDEKL 420
  421 LVFDFMPTGS LSALLHGSRG SGRTPLDWDN RMRIAITAAR GLAHLHVSAK LVHGNIKASN 480
  481 ILLHPNQDTC VSDYGLNQLF SNSSPPNRLA GYHAPEVLET RKVTFKSDVY SFGVLLLELL 540
  541 TGKSPNQASL GEEGIDLPRW VLSVVREEWT AEVFDVELMR YHNIEEEMVQ LLQIAMACVS 600
  601 TVPDQRPVMQ EVLRMIEDVN RSETTDDGLR QSSDDPSKGS EGQTPPGESR TPPRSVTP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle