YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15239831, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSPLLSLCR SPLFYGHGLH VKETSTLTVW VFIYLMRTLV LATFKALWYP YKELKIVVLS  60
   61 SLNRSYCCGI CGIGLFFFVA HLPLSSSLFV FKHCTLFIIS IFQTICFIVF AAIDRRDPHS 120
  121 SWFLKPPSPD YRTIVSRILG IVLLWVMKLA PARFISLIRL SMSLYPSTVT NPSSFELFED 180
  181 DLSIYRDLSW CIALPCLFQK

Type	Start	End	Confidence
Non-Cytoplasmic	1	25	0.76
Transmembrane Helix	26	49	0.77
Cytoplasmic	50	61	0.83
Transmembrane Helix	62	84	0.88
Non-Cytoplasmic	85	92	0.65
Transmembrane Helix	93	113	0.96
Cytoplasmic	114	132	0.87
Transmembrane Helix	133	152	0.90
Non-Cytoplasmic	153	200	0.81