YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	UBC33_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKACIKRL QKEYRALCKE PVSHVVARPS PNDILEWHYV LEGSEGTPFA GGFYYGKIKF  60
   61 PPEYPYKPPG ITMTTPNGRF VTQKKICLSM SDFHPESWNP MWSVSSILTG LLSFMMDNSP 120
  121 TTGSVNTSVA EKQRLAKSSL AFNCKSVTFR KLFPEYVEKY SQQQVAEEEA ATQQTTTSEN 180
  181 QDFPQKDNAK VESEKSVGLK KESIQEVGLK ERRRNKKEAL PGWIVLLLVS IVGVVMALPL 240
  241 LQL

Type	Start	End	Confidence
Cytoplasmic	1	218	0.94
Transmembrane Helix	219	241	0.92
Non-Cytoplasmic	242	243	0.89