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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149021013
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLLGLCLG LPLFSESQEE AQIWDDTSEQ VMLRVPRQLR LLQRLKTKPL MAEFSVKSTI  60
   61 ISRYAFTTVS CRMLNRASED QDAEFQMQIP ESAFITNFTM LIGDNVYQSE ITEKEKKSSD 120
  121 RIKEKRNRTT DDNEEKGTDM FKASLVIPSK DKAAFFLSYE ELLQRRLGKY EHIISVRPQQ 180
  181 LVGRLTVEVN ILERSGITSL EVLPLHNSRK KGSGKAEGDE GPPPSTIINH NETFAKVVFK 240
  241 PTVVQQAKIA QNGILGDFII QYDVKREQNI GDIQVLDGYF VHYFAPKNLP PLPKNVVFVL 300
  301 DISASMVGAK LQQTREALVT ILNDLRPQDR FNIIGFSNRI KMWKDHLLPV TPDNIRNGKI 360
  361 YMYHLSPTGG TDINGALQTA IKLLNNYVAQ NDIEDRSVSL IIFLTDGKPT FGETNTLRIL 420
  421 SNTKEATGGQ ICIFTVGIGN DVDFRLLEKL SLENCGLTRR VHEEEKAGAQ LIGFYDEIRT 480
  481 PLLSDIRIDY PPDAVERVTK TLFPNYFNGS EIVIAGKMAD KKFDQLHVEV TASNSKKFVI 540
  541 LKRDIPVESR KMGNDVSVTP GSVSGGGKDP NHLERLWSYL TVKELLSSWV QSNSEQEKEQ 600
  601 LRQKAQALAL NYHFLTPFTS MKLKKPGLHP NQLEDTHGMS AATGPTTVVQ NLREASMQPE 660
  661 PAPKKPYGPR IKISKTSVDG DPHFVVDFPI SKLTVCFNID GEPGDILRLV SDHLGSGVTV 720
  721 NGELIGAPAP PNGHKKHRTY FRTITILINQ PERSYLEITP NRVILDGGDR LVLPCNQSMV 780
  781 VGSRGLEVSV SANANVTVTI QGTIAFVILI HLYKKPAPFQ RNHLGFYIAN SKGLSHNCHG 840
  841 LLGQFLNQDA KLVGAPEEYG KNLSNHQPSP RAEGMPEAIL KVKGRRVPVV WKQRKIYNGL 900
  901 EQVDCWFDKN NAAKLIDGVY KDYLALHPFD TESARGPSMS RKAEPDSLHE ESA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle