YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: EIN4_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRSLGLGLL LFALLALVSG DNDYVSCNCD DEGFLSVHTI LECQRVSDLL IAIAYFSIPL  60
   61 ELLYFISFSN VPFKWVLVQF IAFIVLCGMT HLLNAWTYYG PHSFQLMLWL TIFKFLTALV 120
  121 SCATAITLLT LIPLLLKWKV RELYLKQNVL ELNEEVGLMK RQKEMSVQVR MLTREIRKSL 180
  181 DKHMILRTTL VELSKILDLQ NSAVWMPNEN RTEMHLTHEL RANPMRSFRV IPINDPDVVQ 240
  241 VRETKVVTIL RKNSVLAVES SGCGGSEEFG PVAAIRMPML HGLNFKGGTP EFVDTPYAIM 300
  301 VLVLPSANSR VWTDKEIEIA EVVADQVAVA ISHASVLEES QLMREKLGIQ NRALLRAKQN 360
  361 AMMASQARNT CQKVMSHGMR RPMHTILGLL SMFQSESMSL DQKIIVDALM KTSTVLSALI 420
  421 NDVIDISPKD NGKSALEVKR FQLHSLIREA ACVAKCLSVY KGYGFEMDVQ TRLPNLVVGD 480
  481 EKRTFQLVMY MLGYILDMTD GGKTVTFRVI CEGTGTSQDK SKRETGMWKS HMSDDSLGVK 540
  541 FEVEINEIQN PPLDGSAMAM RHIPNRRYHS NGIKEGLSLG MCRKLAQMMQ GNIWISPKSH 600
  601 GQTQSMQLVL RFQTRPSIRR SILAGNAPEL QHPNSNSILR GLRITLADDD DVNRTVTKRL 660
  661 LEKLGCEVTA VSSGFECLNA LSNVEMSYRV VILDLQMPEM DGFEVAMKIR KFCGHHWPLI 720
  721 IALTASTEDH VRERCLQMGM NGMIQKPVLL HVMASELRRA LQTASE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle