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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y5659_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNKTNLGLS VFFFFICLVS VTSDLEADRR ALIALRDGVH GRPLLWNLTA PPCTWGGVQC  60
   61 ESGRVTALRL PGVGLSGPLP IAIGNLTKLE TLSFRFNALN GPLPPDFANL TLLRYLYLQG 120
  121 NAFSGEIPSF LFTLPNIIRI NLAQNNFLGR IPDNVNSATR LATLYLQDNQ LTGPIPEIKI 180
  181 KLQQFNVSSN QLNGSIPDPL SGMPKTAFLG NLLCGKPLDA CPVNGTGNGT VTPGGKGKSD 240
  241 KLSAGAIVGI VIGCFVLLLV LFLIVFCLCR KKKKEQVVQS RSIEAAPVPT SSAAVAKESN 300
  301 GPPAVVANGA SENGVSKNPA AVSKDLTFFV KSFGEFDLDG LLKASAEVLG KGTFGSSYKA 360
  361 SFDHGLVVAV KRLRDVVVPE KEFREKLQVL GSISHANLVT LIAYYFSRDE KLVVFEYMSR 420
  421 GSLSALLHGN KGSGRSPLNW ETRANIALGA ARAISYLHSR DATTSHGNIK SSNILLSESF 480
  481 EAKVSDYCLA PMISPTSTPN RIDGYRAPEV TDARKISQKA DVYSFGVLIL ELLTGKSPTH 540
  541 QQLHEEGVDL PRWVSSITEQ QSPSDVFDPE LTRYQSDSNE NMIRLLNIGI SCTTQYPDSR 600
  601 PTMPEVTRLI EEVSRSPASP GPLSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle