YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CHI60_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIKNVIFSL FILAILAETV FSQNCMDTSC PGLKECCSRW GFCGTKDEYC GFFCFSGPCN  60
   61 IKGKSYGYDY NVDAGPRGKI ETVITSALFD SIMSKVESNC SAKGFYTYEA FITAFKSFGA 120
  121 YKGKVAKREI AAILAHFSYG SKSFCYKEEI SNERYCSKSK KYPCEPGKNY YGRGLLQSIT 180
  181 WNEYYGAGKH LGLPLLKDPD LVSRSPEVAF KFAMWFWNRN VRPALYLGFG EITKRVDGRE 240
  241 CGNWRRDDTK NKVKQYIEFC EMLGVTPDQG LDC

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	273	0.99