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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7485405, gi|1...
Protein type: Transmembrane
Type Confidence: 0.54
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTYLMVTLM LALAFYIGLN FIATPPPTSL NTLFDEYSRE PGEFAAGMEE GEDRPIDPIS  60
   61 DIDITRINDL MFNSNFRAAA DENSIVDLSS QVHQLPCCIR FDGPVEVSHY FKPKSSVRLM 120
  121 WKAVEFVDVE IDGVKTEEAH FRGRKLQGAT ISLPSGYSGF VLRQASNLNA NGKRKASMPT 180
  181 EDNQCWEVKA KFNNLTYWNH DSLPSKDDTF FRSFHWFSIA EAVTSENKNL EERVKQSALT 240
  241 LHEREIRESE KREKETRKTP RSSSRLEKAG HLLADWRKRV ILQIWIGESF DDKDYFISGY 300
  301 SRRVEVSKEM ESKEIRSSSV FERSMRFNGL FQDKLRVVEK QNQPPKRFNQ KESNSGFTVI 360
  361 PTKQLCRVYL QKPNLLASKG IIDALAKPPH RIFGRRYDQQ NFKSKLRHLH TTSIDPLKHK 420
  421 FGKEENSLRY FTPLGFSSGS RLGDRKKGKD LSFQEEKPKE MKKLCDQKKE RVVREVKSSL 480
  481 VVSTSRDRVA ADVKFRDLSS SGFISKDINA ESVDCSHGSP ECQTNSEDAH QPSPVSVLEP 540
  541 MFYEDNLDDS EDILDDSEDL PYPNFLSLEN QLETLKSESE SYSDGSGMEV SSDEESALDS 600
  601 AIKESKESEP IGFLDTQESR DSSYIDDILA EVLLGDKNCV PGKRDLVITP KIFEKLEKKY 660
  661 YTETSWKRSD RKILFDRVNS SLVEILESFS ATPTWKKPVS RRLGTALSTC GLKQELWKVL 720
  721 SRQEKRSKKK SLAKVPVIDI DEWLELEADD ESVVCELESM IVDELLSEVV SFM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle