YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DGDG1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN  60
   61 SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG IMKKLQPKIS EFRRVYSAPE 120
  121 ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF 180
  181 AEAERDGEAY FGDWEPIRSL KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD 240
  241 EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD 300
  301 LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT 360
  361 AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT FSSPEEQESY IRKWLEERIG 420
  421 FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF 480
  481 NHVVGIVHTN YLEYIKREKN GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN 540
  541 VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN 600
  601 LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL 660
  661 AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM TKEPLPLTPE QMYNLSWEAA 720
  721 TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT 780
  781 PRTKDYDNQH CKDLNLVPPH VHKPIFGW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle