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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8778399
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.35
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFGKEFSSQ MVPEWQQAYM DYDFLKTLLK EIITFKRRTN NAPSHGGAKT GGGLNRKLTL  60
   61 YRAFSGLVST PRHKRSNSSH DVEEGVQLTG SMRSGPILVN TTASHGYETT FLMAAEEGGE 120
  121 YELVFFRRLD DEFNKVDKFY RKKVEEVLKE AAMLNKQMDA LIAFRVKVEN PDGWRWEERT 180
  181 VEMTRLASDI ATSAAALSAS TPAGAKSMKV RSQEHMEAIQ EGGSSRAGLM EDDEEDEDEQ 240
  241 NETSVVSTGA IDNETTTSRM RGARPSPIDV LGRVKINNTK ETPRSTIKGV LKVSKQTDLK 300
  301 FSRENLMKVE ESLKRAFIEF YQKLRLLKSY SFLNVLAFSK ILKKYDKITS RDATKPYMKV 360
  361 VDSSYLGSSD EVMRLMERVE ATFIKHFANA NRAKAMNILR PKAKRERHRI TFSTGEKISN 420
  421 LHNLGFSIIV SNFVVLMRKL VSGFSAGCVF SLIVALVAII RTRNLLEMEG QKEYMNTMFP 480
  481 LYSLFGFIVL HIIVYAANIY YWRRYRVNYS FIFGFKQGTE LGYRQVLLVG FSIGVLALLC 540
  541 VLANLDMEAD PKTKAYQART EILPLILLAA MFIVLVLPFN YFYRSSRFFF LTCLFHCLAA 600
  601 PLYKVTLPDF FLGDQLTSQV QAIRSIEFYI CYYGWGDFRH RKSTCKESDV YNTFFFIVAV 660
  661 IPYVSRLLQC LRRLFEEKNP EQGYNGLKYF LTIVAVCLRT AYSIQKGQVA WRVLAAVFSF 720
  721 IAAIFCTYWD FVHDWGLLNR TSKNRWLRDK LLVPQKKVYF IAMVLNVLLR FAWIQTVLDF 780
  781 NFSFMHRQTM VAIVASLEII RRGIWNFFRL ENEHLNNVGK YRAFKSVPLP FNYDEDDDKD 840
  841 N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle