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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|5734718, gi|2...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSVPEQNTE KLLWQSSDVA DSRDSKFRCC SWRALYEAPA KLYALGHSDR RKLYFSIKMG  60
   61 IALALCSFVI FLKEPLQDAS KFAVWAILTV VLIFEYYVGA TLVKGFNRAL GTMLAGGLAL 120
  121 GVAQLSVLAG EFEEVIIVIC IFLAGFGASY LKLYASMKPY EYAFRVFKLT YCIVLVSGNN 180
  181 SRDFLSTAYY RILLIGLGAT ICLLVNVFLF PIWAGEDLHK LVAKNFKNVA NSLEGCVNGY 240
  241 LQCVEYERIP SKILTYQASD DPLYSGYRSA VQSTSQEDSL LDFAIWEPPH GPYKTFNHPW 300
  301 KNYVKLSGAV RHCAFTVMAM HGCILSEIQA SPEKRHVFSN ELRRVGNEGA KVLRLFGEKV 360
  361 EKMEKLSLSL GEILKDVQRA AEALQMKIDS KSYLLVNSES WAAIKEQAEA EEARENDQEA 420
  421 KDDETKVIKS LSQIWDTNNN NNHQSNDQSQ HWMSTESMML KNREMWPSMS FIDGTVVNEI 480
  481 ECKVYESASS LSLATFASLL IEFVARLQNI VNAFEELSTK AGFKDAVDQI PKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle