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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP12_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSTPKLLLL LLFIINHHVD SGSIVKFLPG FEGPLPFELE TGYIGIGEEE DVQLFYYFIK  60
   61 SERNPKEDPL LLWLSGGPGC SSITGLLFEN GPLALKSKVY NGSVPSLVST TYSWTKTANI 120
  121 IFLDQPIGAG FSYSRIPLID TPSDTGEVKN IHEFLQKWLS KHPQFSSNPF YASGDSYSGM 180
  181 IVPALVQEIS KGNYICCKPP INLQGYILGN PITYFEVDQN YRIPFSHGMA LISDELYESI 240
  241 RRDCKGNYFN VDPRNTKCLK LVEEYHKCTD ELNEFNILSP DCDTTSPDCF LYPYYLLGYW 300
  301 INDESVRDAL HVNKSSIGKW ERCTYQNRIP YNKDINNSIP YHMNNSISGY RSLIYSGDHD 360
  361 LVVPFLATQA WIKSLNYSII HEWRPWMIKD QIAGYTRTYS NKMTFATVKG SGHTAEYKPN 420
  421 ETFIMFQRWI SGHDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle