YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PGLR6_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYNTSCLIL PLALIILDFT LISSLAHPIP STLNVLSYGA KPDGSKDSTK AFLAAWDVAC  60
   61 ASANPTTIIV PKGRFLVGNL VFHGNECKQA PISIRIAGSI VAPEDFRIIA SSKHWIWFED 120
  121 VTDVSIYGGI LDAQGTSLWK CKNNGGHNCP TGAKSLVFSG SNNIKISGLT SINSQKFHIV 180
  181 IDNSNNVNID GVKVSADENS PNTDGIHVES SHSVHITNSR IGTGDDCISI GPGSTNVFIQ 240
  241 TIRCGPGHGI SIGSLGRAEE EQGVDNVTVS NVDFMGTNNG VRIKTWGKDS NSFARNIVFQ 300
  301 HINMKMVKNP IIIDQHYCLH KPCPKQESGV KVSNVRYEDI HGTSNTEVAV LLDCSKEKPC 360
  361 TGIVMDDVNL VSVHRPAQAS CDNANGSAND VVPFTPCLKR EIIIT

Type	Start	End	Confidence
Signal Peptide	1	26	0.93
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	405	0.99