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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149016917, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSAVAEQGV WQLLLVTFVS YALLPVRSLL AIGFGLVVAA SHLLVTAALV PAKRPRLWRT  60
   61 LGANALLFFG VNMYGVFVRI LTERSQRKAF LQARNCIEDR LRLEDENEKQ ERLLMSLLPR 120
  121 NVAMEMKEDF LKPPERIFHK IYIQRHDNVS ILFADIVGFT GLASQCTAQE LVKLLNELFG 180
  181 KFDELATENH CRRIKILGDC YYCVSGLTQP KTDHAHCCVE MGLDMIDTIT SVAEATEVDL 240
  241 NMRVGLHTGR VLCGVLGLRK WQYDVWSNDV TLANVMEAAG LPGKVHITKT TLACLNGDYE 300
  301 VEPGHGHERN TFLRTHNIET FFIVPSHRRK IFPGLILSDI KPAKRMKFKT VCYLLVQLMH 360
  361 CRKMFKAEIP FSNVMTCEDD DKRRALRTAS EKLRNRSSFS TNVVYTTPGT RVNRYISRLL 420
  421 EARQTELEMA DLNFFTLKYK HVEREQKYHQ LQDEYFTSAV VLALILATLF GLIYLLVIPQ 480
  481 SVAVLLLLVF SICFLVACTL YLHITRVQCF PGCLTIQIRT ALCVFIVVLI YSVAQGCVVS 540
  541 CLPWAWSSHS NSSLVVLAAG GRRTVLPALP CESAHHGLLC CLVGTLPLAI FLRVSSLPKM 600
  601 ILLSGLTTSY ILVLELSGYT KVGGGALSGR SYEPIMAILL FSCTLALHAR QVDVRLRLDY 660
  661 LWAAQAEEER DDMERVKLDN KRILFNLLPA HVAQHFLMSN PRNMDLYYQS YSQVGVMFAS 720
  721 IPNFNDFYIE LDGNNMGVEC LRLLNEIIAD FDELMDKDFY KDLEKIKTIG STYMAAVGLA 780
  781 PTAGTRAKKS ISSHLSTLAD FAIDMFDVLD EINYQSYNDF VLRVGINVGP VVAGVIGARR 840
  841 PQYDIWGNTV NVASRMDSTG VQGRIQVTEE VHRLLNRCSY QFVCRGKVSV KGKGEMLTYF 900
  901 LEGRTDGSSS HSRSLRLERR MFPYGRGGGG QARRPPLCPA AGPPIKPGLS PAPTSQYLSS 960
  961 TAAGKEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle