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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME12_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSSFNLSS LLFLLFFTPS VFSYSYQPSL NPHETSATSF CKNTPYPDAC FTSLKLSISI  60
   61 NISPNILSFL LQTLQTALSE AGKLTDLLSG AGVSNNLVEG QRGSLQDCKD LHHITSSFLK 120
  121 RSISKIQDGV NDSRKLADAR AYLSAALTNK ITCLEGLESA SGPLKPKLVT SFTTTYKHIS 180
  181 NSLSALPKQR RTTNPKTGGN TKNRRLLGLF PDWVYKKDHR FLEDSSDGYD EYDPSESLVV 240
  241 AADGTGNFST INEAISFAPN MSNDRVLIYV KEGVYDENID IPIYKTNIVL IGDGSDVTFI 300
  301 TGNRSVGDGW TTFRSATLAV SGEGFLARDI MITNTAGPEK HQAVALRVNA DFVALYRCVI 360
  361 DGYQDTLYTH SFRQFYRECD IYGTIDYIFG NAAVVFQGCN IVSKLPMPGQ FTVITAQSRD 420
  421 TQDEDTGISM QNCSILASED LFNSSNKVKS YLGRPWREFS RTVVMESYID EFIDGSGWSK 480
  481 WNGGEALDTL YYGEYNNNGP GSETVKRVNW PGFHIMGYED AFNFTATEFI TGDGWLGSTS 540
  541 FPYDNGI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle