YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25407864, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERISDHANA NRIYDEFEPL SNWKTEQGFE ALTIYLPGFR KEQLKVQVTT TRKLRVMGDR  60
   61 PAGANKWIRF RKEFPIPPNI DVDSVSAKFE GANLVVRLPR TEPMGKQPSP IGTATKPPPV 120
  121 PKENPNLPSP SAKEKVQPPK ETRENETELE KQAEKIQSPK PARENEEALN QDYRSKVNEY 180
  181 KENLGGYVAL MKNNRTALTA GVVVPAAAVL LLSLGFYAGQ MFTS

Type	Start	End	Confidence
Cytoplasmic	1	196	0.95
Transmembrane Helix	197	219	0.91
Non-Cytoplasmic	220	224	0.85