YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149015586
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIQQMGSLG FLDRSNIPLV LQLLFLILFA GLLVAIVIQV SKIPSSEEVQ WEQTKQEKMY  60
   61 QDLSQLKSEI DSLCRLCPWD WTFFNGNCYF FSKSQRDWHN SITACQEMEA QLVTIKSPEE 120
  121 QSFLQQTSKK NGYTWMGLSD LNKEGEWYWL DGSPLSDSLR NYWNEGQPNN IDGQDCVEFR 180
  181 NDGWNDAKCD NWKFWICKKT ATTCSSK

Type	Start	End	Confidence
Cytoplasmic	1	18	0.89
Transmembrane Helix	19	40	0.91
Non-Cytoplasmic	41	207	0.94