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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3355467, gi|7...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKPKSVHF STSSPKSFLS SFPSFTSLPA SPLNQTFSQS MMEETVEAAE SIIKKWDPNS  60
   61 PSYTKIISLF SHSRREAKEF IRCIRDLRRA MHFLISQHSK SAKLVLAQHL MQIAMARLEK 120
  121 EFFQILSSNR DQLDPESVSG HSSISSNSEF EDVMQSSDDE EEDELKKAGE TITKVEKAAA 180
  181 LVMSDLKVIA ETMISCGYGK ECIKSYKLIR KSIVDEGLHL LGIEKCKISR FNRMDWDVLE 240
  241 HMIKNWIKAA KIGVITLLRG EKLLCDHVFS ASSTIRESCF YEIVNEAGIN LFKFPELVAE 300
  301 KKPSPERIFR LMDLYAAISD LRPDIELIFH FDSVAAVKTL VLSSLKKLKD SIYTSLMEFE 360
  361 STIQKDSSKA LTAGGGIHKL TRSTMSFISS LSEYSRVLSE ILAEHPLKKN TRMLESYFTA 420
  421 PILEDEHNNH AVSVHLAWLI LIFLCKLDIK AESYKDVSLS YLFLVNNIQF VVDTVRSTHL 480
  481 RNLLGDDWLT KHEAKLRSYA ANYEIAAWAN VYISLPEKTS SRLSPEEAKT HFKRFHAVFE 540
  541 EAYMKQSSCV ITDAKLRNEL KVSIAKKIVP EYREFYGKYL PTLSKERNIE MLVSFKPDNL 600
  601 ENYLSDLFHG TPILSGSSSS SSSLSSSSCI SLGCVRN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle