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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FTSHB_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSTLQASL FLRPPLHTSS FKLYPCLFSS SSLSFCPQSL SSFYRLSSVL HNSRFRPLPC  60
   61 SLRQDNVASD SDFIPKDSAF EVTDSAESNR LVSDTEVSEL ETNDRFVGGE ETKSGGEEAE 120
  121 VSNGVTEGKE EDQKKSKFRI VVLMMALWAA IKRAIEKVME WEWLSWWPFS RQEKRLEKLI 180
  181 AEADANPKDA ALQGALLAEL NKHIPEAVVQ RFEQREHTVD SRGVAEYIRA LVITNAISEY 240
  241 LPDEQTGKPS SLPALLQELK HRASGNMDES FVNPGISEKQ PLHVTMVNPK VSNKSRFAQE 300
  301 LVSTILFTVA VGLVWIMGAA ALQKYIGSLG GIGTSGVGSS SSYSPKELNK EITPEKNVKT 360
  361 FKDVKGCDDA KQELEEVVEY LKNPSKFTRL GGKLPKGILL TGAPGTGKTL LAKAIAGEAG 420
  421 VPFFYRAGSE FEEMFVGVGA RRVRSLFQAA KKKAPCIIFI DEIDAVGSTR KQWEGHTKKT 480
  481 LHQLLVEMDG FEQNEGIIVM AATNLPDILD PALTRPGRFD RHIVVPSPDV RGREEILELY 540
  541 LQGKPMSEDV DVKAIARGTP GFNGADLANL VNIAAIKAAV EGAEKLSSEQ LEFAKDRIVM 600
  601 GTERKTMFVS EDSKKLTAYH ESGHAIVALN TKGAHPIHKA TIMPRGSALG MVTQLPSNDE 660
  661 TSVSKRQLLA RLDVCMGGRV AEELIFGLDH ITTGASSDLS QATELAQYMV SSCGMSEAIG 720
  721 PVHIKERPSS DMQSRIDAEV VKLLREAYER VKSLLKRHEK QLHTLANALL EYETLTAEDI 780
  781 KRILLPKQEG EKFEEQQQEE GDLVLA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle