YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25337669, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.68
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKLVQLQS KACQASKFVA KHGNSYYKQL LEQNKQYIQE PATIEKCSEL SKQLLYTRLA  60
   61 SIPGRYETFR KEVDYAKNLL KNRANLKVED AGIAALFGLE CFAWFCAGEI VGRGFTFTGY 120
  121 YP

Type	Start	End	Confidence
Cytoplasmic	1	90	0.66
Transmembrane Helix	91	111	0.62
Non-Cytoplasmic	112	122	0.86