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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8778871
Protein type: Globular with Signal Peptide
Type Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVHGRFPAS PPISLSPSSS STSPSSQSPS TPPDLKQRVI ACLNKLADRD TLALASAELD  60
   61 SIARNLTHDS FSPFLNCIHN TDSSVKSPVR KQCVALLSVL SRYHGDSLTP HLAKMVSTVI 120
  121 RRLRDPDSSV RSACAVATAD MSAHVTRQPF ASVAKPLIET LIQEGDSNLQ IGAALCLAAS 180
  181 VDAATDPESE QLRKSLPKIG KLLKSDGFKA KAALLSAVGS IITAGGAGTK PVLDWLVPVL 240
  241 IEFLSSEDWA ARKSAAEALG KVATAEDLAS QYKKTCTTAL ESRRFDKVKS VRETMNRALN 300
  301 LWKEVSTDDE ASLSPSRSST DDGNIGCFSS VTRSSTIDVG LKSARPKKVT PIMKRSPSLP 360
  361 VNRSYAATRQ KENLPKRNQG NMTMLVEEAS SVDNKGPHFT PVKKSSEETE EKANSGGPDI 420
  421 IKHTISEKSR EDSKVSSFGG LRSGSRVAPC SDDGDSVKNC KDDVEESKKD SEELSLIREQ 480
  481 LALIENQQSS LLDLLQKFMG TSQSGIQSLE SRVSGLEMAL DEISCDLAVS NGRVPRNSSG 540
  541 CAGDSCSKLP GTEFLSPKFW RKTEERPRNR NTANEMAAYD QGMRESTDTN NGQRGGSVFQ 600
  601 KRSRRDQFQD CMHTTLQKPT TRTVESSTSF YINPTEPSSI DLITPVSGS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle