YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157787058, gi...
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPRSMLKEW ALHTFPNATD YWTFRKMFTI QLALIGFAEF VLHLNRLNPE MLQIAQDTGK  60
   61 LNVAYFRFDI NDATGDLDAN RPVPFRLTPN ISEFLTTIGV SGPLTASMIA VSRCFAQPNF 120
  121 KVDGILKTVL RDEIIAWHKK TQEDTSSALS AAGQPENMDS QQLVSLVQKA VTAVMTRLHN 180
  181 LAQFDGGESK VNTLVAAANS LDNLCRMDPA WHPWL

Type	Start	End	Confidence
Cytoplasmic	1	20	0.63
Transmembrane Helix	21	43	0.62
Non-Cytoplasmic	44	215	0.71