YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7485631, gi\|5...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADPDLSSPL IHHQSSDQPE VVISIADDDD DESGLNLLPA VVDPRVSRGF EFDHLNPYGF  60
   61 LSESEPPVLG PTTVDPFRNN TPGVSGLYEA IKLVICLPIA LIRLVLFAAS LAVGYLATKL 120
  121 ALAGWKDKEN PMPLWRCRIM WITRICTRCI LFSFGYQWIR RKGKPARREI APIVVSNHVS 180
  181 YIEPIFYFYE LSPTIVASES HDSLPFVGTI IRAMQVIYVN RFSQTSRKNA VHEIKGCKYR 240
  241 EKLPAIDFLV CCYSPKEPRL MGKFLFPSNS VLSSLVTLFN L

Type	Start	End	Confidence
Cytoplasmic	1	98	0.94
Transmembrane Helix	99	118	0.88
Non-Cytoplasmic	119	139	0.85
Transmembrane Helix	140	159	0.93
Cytoplasmic	160	281	0.89