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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME20_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQKLMFLFT LACLSSLPSP FISAQIPAIG NATSPSNICR FAPDPSYCRS VLPNQPGDIY  60
   61 SYGRLSLRRS LSRARRFISM IDAELDRKGK VAAKSTVGAL EDCKFLASLT MDYLLSSSQT 120
  121 ADSTKTLSLS RAEDVHTFLS AAITNEQTCL EGLKSTASEN GLSGDLFNDT KLYGVSLALF 180
  181 SKGWVPRRQR SRPIWQPQAR FKKFFGFRNG KLPLKMTERA RAVYNTVTRR KLLQSDADAV 240
  241 QVSDIVTVIQ NGTGNFTTIN AAIAAAPNKT DGSNGYFLIY VTAGLYEEYV EVPKNKRYVM 300
  301 MIGDGINQTV ITGNRSVVDG WTTFNSATFI LSGPNFIGVN ITIRNTAGPT KGQAVALRSG 360
  361 GDLSVFYSCS FEAYQDTLYT HSLRQFYREC DVYGTVDFIF GNAAVVLQNC NLYPRQPRKG 420
  421 QSNEVTAQGR TDPNQNTGTA IHGCTIRPAD DLATSNYTVK TYLGRPWKEY SRTVVMQTYI 480
  481 DGFLEPSGWN AWSGDFALST LYYAEYNNTG PGSDTTNRVT WPGYHVINAT DASNFTVTNF 540
  541 LVGEGWIGQT GVPFVGGLIA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle