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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|148921686
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYHLFFVVF GIYVVDAQKP TCLIVAPNVI HLGVEETVGV QLHGATKEIR MKLYFEKQKE  60
   61 SEILSEIRSI ILNENNNYQA VVKLKVDATM YGDVEKNSYV QLAAISNDIF EKQDARKANI 120
  121 YLSTKRGYIF VQTDKPIYNP GENVKYRIFI LDNYMLPIQD ELHVQITNSK GLIVYNRVLI 180
  181 INQILDKTIT IPEVEQTGKW KIITSFHKFP ESTTTVEFEV KEYVLPTFEV KIEASQPYHI 240
  241 LMSESFPFNI SARYTYGKGV NGIAYVRFGL VDEKHNKIYL PGTEKQITVE DGTAGTAVLT 300
  301 KDLKTASQNI TQGYIEGYYI YIAVSVLDKA SGMLEEAESS SVKIVTSPYV VDLSKTKTYF 360
  361 TPGGVFSVLA TATYPDGNRA PNLKFTATIT IDGSSEQILQ NESWGNEMGD VAMSFQIPPQ 420
  421 AKNLAITVFA EGGDQVVIRS DNKMTASAIT AEEQSYLSLE VEKQFLQAGE DLKARLRDIT 480
  481 PEGAAKPTFF YFMVWSKGQI VQMGRVPRTA FTTVNVKVNV DMVPSFRLVA YYFTGSASKE 540
  541 SVVADSVWVD VKDVCKGKME INPLAEIKPA TQFEVTVETN PKTKVALVAV DSAVYILNKN 600
  601 KLSLQKMFDY MNSYDLACSV GGGEDSSAVL QRAGLTFICN CALKTPTALE HKCNKKTTNR 660
  661 VRRAPDYVAK YNAVVNSFKN QDRKCCLDGV RPSKMQTSCV DRLKRVKESE SCRKAFKECC 720
  721 EAADERRKRE KFEKRKTSLG RVVGDSFDEI VINEDLIYIR NYFPQSWMWT VIESDNKGLI 780
  781 RHEVVAPDSI TTWEVQAVGI SPTKGFCIAE PKPLTVFKDF FLSVNLPYSV KRNEQLQVKA 840
  841 VVYNYKQESL KVIVKLNKVE GLCTAGGNDV KEEVTVSGNS AVTVYFTVVP LIIGNLHIDV 900
  901 LAYASEIIHD RVEKKLRVEG EGELTSIDRE FNIDPNLKKK KK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle