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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12321049, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESQLWNWIL PLLISSLLIS FVAFYGFFVK PKRNGLRHDR KTVSTVTSDV GSVNITGDTV  60
   61 ADVIVVGAGV AGSALAYTLG KDKRRVHVIE RDLSEPDRIV GELLQPGGYL KLLELGIEGL 120
  121 STDCVEEIDA QRVYGYALFK NGKRIRLAYP LEKFHEDVSG RSFHNGRFIQ RMREKAASLP 180
  181 NVQLEQGTVL SLLEENGTIK GVRYKNKAGE EQTAFAALTI VCDGCFSNLR RSLCNPQVEV 240
  241 PSCFVGLVLE NCNLPYANHG HVVLADPSPI LMYPISSTEV RCLVDVPGQK VPSIANGEMK 300
  301 NYLKTVVAPQ MPHEVYDSFI AAVDKGNIKS MPNRSMPASP YPTPGALLMG DAFNMRHPLT 360
  361 GGGMTVALAD IVVLRNLLRP LRDLSDGASL CKYLESFYTL RKPVAATINT LANALYQVFC 420
  421 SSENEARNEM REACFDYLGL GGMCTSGPVS LLSGLNPRPL TLVCHFFAVA VYGVIRLLIP 480
  481 FPSPKRIWLG AKLISGASGI IFPIIKAEGV RQMFFPATVP AYYYKAPTVG ETKCS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle