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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25407959, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTELQYQEII LLQSLSSFAG VNGLLTDLKI NHSEFGRMVQ SCAAVTDLVI FIMVSGTVLL  60
   61 KGQKGLPHGI VIVLVIGFLV YIVWPVMLWI IKQTPEGRLV KDVYIYLVMA TAYFVYMFWL 120
  121 NFFQFSTYGW FIIGLATPAG PPLGSALIQR FECFNVGVLL PLFGSLSMEQ LDISWLMREI 180
  181 LNLKHMEGFA YEAISVILIV TVVKFVVTAI TAFAVRIPYR DSIVLAMVLS NRSIFELGYL 240
  241 GYIVELKMFD NKSFTIAALS VLVSSLLTPI AIEFMYEPQH IFSSYRDRNM LTLKHDSKLK 300
  301 TLVCIHKPDH ITSMVNFVEL FNPTQESKLE CNVLHLVELI GQAIPTFISH KMQKPKVGTR 360
  361 SCSRNVITAF LSLRRHLTKE AISIDIFTSA SLVEHMHEDL CWLALDKNVA LVVLPFHRSW 420
  421 SVDRSTIVSD DKAMQNLNHK VLKRASCSVG IFVYRKPLWE SQMHGSCYKV CAIVVGGKDD 480
  481 KEALAFTNRM RRNKQTSVTI LHLIPQLTTE ESEDSVQKLD YDDIKEIMKT EDSNENDSWI 540
  541 CIEKSVKEGA ETSVILRSIA YDYDLFIVGR SSGMNSAVTK GLNEWTEFEE LGALGDVIAS 600
  601 KEFPSRASVL VLQQQQY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle