YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRR3_ARATH
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVLSTIYSI TRASTPTMAS LTNDSPSPLP SSSPSKLPSP TSPSKKPLKL RQVSKQMGSQ  60
   61 NQQRRGNKPS IAQIERAFGS GSYRDSEGEM DMNTVFDELL LGHANKFESK IEKKLREIGE 120
  121 IFVARTEPKL RSSGKPVLMF TIQWILPIWI MSLLVACGVI KLPFSIPFLD DLIM

Type	Start	End	Confidence
Cytoplasmic	1	139	0.91
Transmembrane Helix	140	164	0.85
Non-Cytoplasmic	165	174	0.86